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Semantic MEDLINE: An Advanced Information Management Application for Biomedicine

Thu, 10/09/2014 - 10:57 -- Rolando Garcia-...

On November 12 from 11.00 AM- 12.00 PM,  the Yale Medical Library will be hosting a presentation on Semantic Medline by Dr. Marcelo Fiszman, Research Scientis, Lister Hill Nat. Ctr. for Biomed. Comm. National Library of Medicine, National Institutes of Health

Semantic MEDLINE integrates information retrieval, advanced natural language processing, automatic summarization, and visualization into a single Web portal. The application is intended to help manage the results of PubMed searches by condensing core semantic content in the citations retrieved. Output is presented as a connected graph of semantic relations, with links to the original MEDLINE citations. The ability to connect salient information across documents helps users keep up with the research literature and discover connections which might otherwise go unnoticed. Semantic MEDLINE can make an impact on biomedicine by supporting scientific discovery and the timely translation of insights from basic research into advances in clinical practice and patient care.

Dr. Fiszman has an M.D. from the State University of Rio de Janeiro and a Ph.D. in biomedical informatics from the University of Utah. He was awarded a postdoctoral fellowship in biomedical informatics at the National Library of Medicine (NLM) and is currently a research scientist there. His work focuses on natural language processing algorithms that exploit symbolic, rule-based techniques for semantic interpretation of biomedical text. He is also interested in using extracted semantic information for automatic abstraction summarization and literature-based discovery. These efforts underpin Semantic MEDLINE, which is currently under development at NLM. This innovative biomedical information management application combines document retrieval, semantic interpretation, automatic summarization, and knowledge visualization into a single application.

 

Date:             November 12, 2014 – 11.00- 12.00

Location:      Historical Library, Cushing/Whitney Medical Library, 333 Cedar St, New Haven, CT 06520

Registration required - limited seating

 

 

Photos published by The New Yorker

Fri, 10/03/2014 - 10:28 -- Terry Dagradi

On Oct 2, 2014, The New Yorker published a photo essay on a small selection of patient photographs from The Cushing Tumor Registry.  The article mentions the number of photographs as fifteen hundred, but a closer estimate of the 5x7 inch glass and film negatives is between ten and fifteen thousand. 

The promise of seeing hundreds of glass jars of brains and tumors is what often draws guests to the Cushing Center. But it is the photographs of the patients on display that connect the viewers to the individuals that Cushing cared for during the early and often dangerous days of neurosurgery.

http://www.newyorker.com/culture/photo-booth/harvey-cushing-brain-tumor-registry

Curatorial tour of three new exhibits in the Cushing/Whitney Medical Library

Thu, 09/18/2014 - 12:27 -- Andy Hickner

Join us for a tour of 3 fascinating and diverse Medical Library exhibits – The Body as a Machine, Vesalius at 500, and Dangers of Underage Drinking and other Historical Posters. The tour will be led by Melissa Grafe, Librarian for Medical History, and Susan Wheeler, Curator at the Medical Library. As part of the tour, the cases will be opened to view the objects. Please meet at the circulation desk. You may RSVP to historical.library@yale.edu or at 203 785-4354.

New Interface for ClinicalKey

Thu, 09/18/2014 - 09:02 -- Nathan Rupp

A new interface for ClinicalKey will be released on September 23. The new interface will include a cleaner, mobile-friendly design for discovering clinical content on the go. It will also introduce 1,400 topic pages that offer quick access to point-of-care content, including risk factors, treatments, and more.

For further information about the new interface, go to clinicalkeyupgrade.com

Electrosurgical in the Operating Room

Fri, 09/12/2014 - 08:37 -- Andy Hickner

(Post authored by Terry Dagradi)
Cushing operating at the Peter Bent Brigham Hospital
Cushing operating at the Peter Bent Brigham Hospital
Photo by Dr. Walter Willard Boyd 1928-32

On October 1, 1926 at Peter Bent Brigham Hospital in Boston, Massachusetts, Harvey Cushing performed an operation—removal of a mass from a patient’s head -- using the first commercial electrosurgical generator developed by to William T. Bovie [1], an engineer employed at Harvard University. The Bovie unit passed high frequency alternating current into the body, allowing the current to cut or coagulate. The device drastically reduced the complications of bleeding during intracranial operations, further reducing the mortality rates during brain surgery. After 88 years this basic device remains a fundamental tool in the practice of surgery.

When Cushing began his surgical career in the early 1900s, brain tumors were considered to be inoperable. At that time the mortality rate for a surgical procedure involving the opening of the skull was around 90%. Cushing dramatically reduced the mortality rate for neurosurgery to less than 10%, and by the time of his retirement from the Peter Bent Brigham Hospital in 1932, he had successfully removed more than 2,000 tumors.[2]

[1] Bovie, WT; Cushing, H (1928). "Electrosurgery as an aid to the removal of intracranial tumors with a preliminary note on a new surgical-current generator". Surg Gynecol Obstet 47: 751–84.

[2] http://www.whonamedit.com/doctor.cfm/980.html

Additional information on Electrosurgery: http://www.albertahealthservices.ca/ps-1009154-electrocautery.pdf

http://contemporaryobgyn.modernmedicine.com/contemporary-obgyn/news/electrosurgery-newest-energy-based-devices?page=full

http://www.uptodate.com/contents/overview-of-electrosurgery

Renovated CRL reopens as the 24/7 Computer & Study Space

Wed, 06/25/2014 - 19:28 -- Mark Gentry

       

                       

                                                      

The Medical Library Computer Resource Laboratory (CRL) has reopened with a very different look. We decided it deserved a new name - the 24/7 Computer & Study Space. The new name emphasizes the multiple purposes of the room and reminds our users that is accessible to anyone with a Yale University ID badge anytime, day or night.  Some of the changes you will see in the renovated space are:

  • All new furniture with more work space
  • Upgraded monitors on Windows computers
  • New software such as qualitative analysis software packages Atlas.ti and nVivo
  • Height-adjustable tables (great for laptop users)
  • A large wall-mounted monitor for collaborative work
  • COMING SOON! Soft seating for the area around the monitor

Entrance to the 24/7 Space is through the door just past the newspaper reading area whenever the library is open.  After hours entry is from the stairwell just outside the entrance to the Medical Library.  We hope you will enjoy the enhancements to this space.

YaleLinks & Journal List: New Look

Thu, 06/19/2014 - 16:08 -- Jan Glover

As you know, YaleLinks allows quick electronic access to journals and journal articles.  On Monday, June 23rd, there will be a dramatic change in the way the YaleLinks menu looks in order to access a journal or article.  However, the new YaleLinks menu has all of the same functionalities as before, allowing direct access to full text articles and linking out to Inter Library Loan (ILL).

If you use the A-Z journal title list you will also see a change in the way it looks. But again, there is no compromise to functionality.

We expect that the new interface will be easy to navigate, but if you encounter trouble while using YaleLinks, please contact the library at http://library.medicine.yale.edu/services/crs/email.

Kenny Marone retires

Wed, 05/07/2014 - 13:28 -- Jan Glover

Kenny Marone

Medical Library Director, Kenny Marone retired on May 1, 2014 after 36 years of service. Susan Gibbons, University Librarian, expressed it best in her January 17, 2014 email to the entire Library staff:

In recent years, Kenny has held two vital positions at YUL.  She is Director of the Cushing/Whitney Medical Library at Yale University, which has balance modern innovation with the stewardship of one of the most important history of medicine and science collection in the world.  Under Kenny’s leadership the Medical Library has become a campus-wide leader embracing technology, change, innovation, and creative staff participation.  Her goal has always been to make the Medical Library indispensable to faculty, students, and staff.

Kenny is also Associate University Librarian for Research Support and Collections with oversight of CSSSI and the science libraries, Art Library, Divinity Library, Music Library, International Collections & Research Support, and Humanities Collections & Research Support, as well as Collection Development.  In her AUL role she has worked to ensure that access to YUL’s services and resources is seamless for faculty and students and fostered collaboration across all of YUL’s libraries.

Kenny’s professional life has coincided with a period of rapid technology transfer in how information is received, organized and disseminated.  During her tenure at Yale, the Medical Library has been a leader in the migration from print to electronic.  She has led and worked on a variety of committees within YUL, the Yale School of Medicine, and at the university level.  Recently, her excellent leadership was keenly felt in the creation of the Center for Science and Social Science Information (CSSSI) which combined the former Science Library, the Social Science Library and the StatLab.

As an active library professional, Kenny has worked with local, regional and national professional organizations.  She has published extensively in the areas of technology and user interfaces and has demonstrated a keen interest in the role of the librarian in the future.  Kenny has served as a formal and informal mentor to dozens of librarians thus ensuring that her passion for patron-focused library services will be a key part of her enduring legacy on the profession. 

Please join me in expressing best wishes to Kenny in her next adventure, which will undoubtedly be shared with a dog or two!

Best wishes,

susan

John Gallagher, Interim Medical Library Director

Wed, 05/07/2014 - 13:26 -- Jan Glover

John Gallagher

University Librarian Susan Gibbons announced the appointment of John Gallagher to Interim Director of the Medical Library:

I am pleased to announce that John Gallagher will serve as the interim director of the Cushing/Whitney Medical Library upon the departure of Kenny Marone on May 1nd.  The position of director of the Cushing/Whitney Medical Library also reports to the Medical School, and John’s interim appointment carries the full support of Richard Belitsky, Deputy Dean for Education at the School of Medicine

John has been the Associate Director of the Medical Library since October 2011 and, since Kenny’s appointment as AUL for Research Support and Collection he has represented the Medical Library on numerous forums within both the School of Medicine and the Library. John joined Yale in November 1999 as a casual employee at the Library Shelving Facility and since then has held numerous leadership positions of increasing responsibility at the Medical Library. In April 2000 he became the Evening and Weekend Circulation Supervisor, and in July was appointed as the Head of Circulation. He pursued his MLS shortly thereafter, graduating from Southern Connecticut State University in January 2005. Other positions he has held include Access Services Librarian and Deputy Director for Public Services.

John has led strategic planning initiatives at the Medical Library, and co-chaired the inaugural University Library’s Joint Departmental Best Practices effort that strived to improve Labor/Management relations at Yale University. He has been involved in the management of a number of major construction projects at the Medical Library, including The Cushing Center, which is home to Harvey Cushing’s Brain Tumor Registry, and a complete renovation of the Medical Historical Library’s rare book stacks to upgrade environmental conditions to archival standards. Currently he is working with the YSM’s Office of Education to address space concerns associated with the redesign of the School of Medicine’s curriculum.

John is a recent graduate of the 2012/2013 NLM/AAHSL Leadership Fellows Program, a program focused on preparing emerging leaders for director positions in academic health sciences libraries. He has also served on both the Executive Committees of the North Atlantic Health Sciences Libraries and the Connecticut Association of Health Sciences Libraries. From its foundation in 2010 until 2012, John served on the Governance Committee of the Medical Heritage Library, a digital curation collaborative among some of the world’s leading medical libraries, that promotes free and open access to quality historical resources in medicine. Finally, John has authored a number of articles related to operational management in medical libraries, and has been the Principal Investigator on grants related to the digitization of some of the Cushing/Whitney Medical Historical Library’s remarkable collections.

Please join me in thanking John for his willingness to serve as the interim director and his assistance in ensuring a smooth leadership transition for the Medical Library.

Best wishes,

susan

Staff Updates: New Biomedical Sciences Research Support Librarian

Wed, 04/30/2014 - 10:25 -- Andy Hickner

Rolando Garcia-Milian

The Cushing/Whitney Medical Library welcomes Rolando Garcia Milian as the Library's Biomedical Sciences Research Support Librarian. In this role, Rolando will serve as the primary liaison between the Medical Library and research departments, laboratories, and individual scientists across the Medical Center.

Rolando brings to this position some wonderful expertise that we are really excited to bring on board at the Medical Library. Since graduating from SCSU with an MLS in 2010, Rolando has worked at the University of Florida's Health Science Center Libraries as a Basic Biomedical Sciences Librarian. In this role he has delivered biomedical information, data, and bioinformatics support, and most recently has co-taught a for credit bioinformatics course to UFL students. Prior to entering librarianship, Rolando was a molecular biologist for the Center for Genetic Engineering and Biotechnology in Havana, Cuba. Rolando previously worked at Yale University Library from 2008 to 2010, both at the Library Shelving Facility and then as a Cataloging Assistant at the Sterling Memorial Library.

Monday, May 5th will be Rolando's first day. He may be reached by email at rolando.milian@yale.edu, by phone at (203)785-6194, and his desk is located at SHM L 111 here at the Medical Library.

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